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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UVM rs55985464 chr12:9813710 TGTC/T 0.000125 67 27.88 21.8 7.6 KM Plot
UVM rs56320334 chr12:9759287 G/GTA 0.00014 66 26.98 22.33 7.6 KM Plot
UVM rs56357339 chr7:151111730 C/T 0.00011 67 26.98 24.45 7.6 KM Plot
UVM rs56384845 chr15:40871710 C/A 0.000227 67 27.87 26.12 16.78 KM Plot
UVM rs56896704 chr12:132568752 A/C 3.4E-7 67 31.83 23.25 0.73 KM Plot
UVM rs57948063 chr12:132568726 GC/G 3.91E-7 65 32.02 22.87 0.73 KM Plot
UVM rs58405709 chr2:201950456 A/AAT 3.58E-7 66 24.62 27.9 1.27 KM Plot
UVM rs58409115 chr12:132597110 CA/C 4.5E-7 66 31.55 23.25 0.73 KM Plot
UVM rs5841089 chr20:30305205 AC/A 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs58435801 chr7:151111835 G/GAGAT 0.00011 67 26.98 24.45 7.6 KM Plot
UVM rs58521339 chr12:132609486 T/C 5.35E-7 66 27.92 23.87 0.73 KM Plot
UVM rs58828920 chr12:132615464 C/CCCTGAGTG 4.1E-7 66 31.83 22.87 0.73 KM Plot
UVM rs58921053 chr12:132579551 C/T 3.4E-7 67 31.83 23.25 0.73 KM Plot
UVM rs59855685 chr12:132604134 GCT/G 3.82E-7 66 31.83 23.63 0.73 KM Plot
UVM rs6058274 chr20:30239046 A/C 6.07E-5 67 7.6 14.23 27.9 KM Plot